elephant.spike_train_generation.StationaryLogNormalProcess

class elephant.spike_train_generation.StationaryLogNormalProcess(rate: Quantity, sigma: float, t_start: Quantity = array(0.) * s, t_stop: Quantity = array(1.) * s, equilibrium: bool = True)[source]

Generates spike trains whose spikes are realizations of a stationary LogNormal process with the given rate and sigma starting at time t_start and stopping at time t_stop.

Parameters:
ratepq.Quantity

The constant firing rate.

sigmafloat

The sigma/ s parameter of the Log-Normal distribution.

t_startpq.Quantity, optional

The start of the spike train. Default: 0.*pq.s

t_stoppq.Quantity, optional

The end of the spike train. Default: 1.*pq.s

equilibriumbool, optional

Generate an equilibrium or an ordinary renewal process. Default: True
Raises:
ValueError

If one of rate, t_start and t_stop is not of type pq.Quantity.

Examples

>>> import quantities as pq
>>> spiketrain = StationaryLogNormalProcess(
...     rate=50*pq.Hz, sigma=2.0, t_start=0*pq.ms,
...     t_stop=1000*pq.ms).generate_spiketrain()
>>> spiketrain_array = StationaryLogNormalProcess(
...     rate=20*pq.Hz, sigma=5.0, t_start=5000*pq.ms,
...     t_stop=10000*pq.ms).generate_spiketrain(as_array=True)

Methods

__init__(rate, sigma[, t_start, t_stop, ...])
generate_n_spiketrains(n_spiketrains[, as_array]) Generates a list of spike trains.
generate_spiketrain([as_array]) Generates a single spike train.

Attributes

expected_cv The expected coefficient of variation given the ISI distribution.
mu The parameter mu of the log-normal distribution.
t_start t_start quantity; there are no spike times below this value.
t_stop t_stop quantity; there are no spike times above this value.
property expected_cv

The expected coefficient of variation given the ISI distribution.

generate_n_spiketrains(n_spiketrains: int, as_array: bool = False) → Union[List[SpikeTrain], List[ndarray]]

Generates a list of spike trains.

Parameters:
n_spiketrainsint

The number of spike trains to generate.

as_arraybool, optional

If True, a NumPy array of sorted spikes is returned, rather than a neo.SpikeTrain object. Default: False
Returns:
list_of_spiketrainlist of neo.SpikeTrain or list of np.ndarray

A list generated spike trains in the specified format.
generate_spiketrain(as_array: bool = False) → Union[SpikeTrain, ndarray]

Generates a single spike train.

Parameters:
as_arraybool, optional

If True, a NumPy array of sorted spikes is returned, rather than a neo.SpikeTrain object. Default: False
Returns:
spiketrainneo.SpikeTrain or np.ndarray

The generated spike train in the specified format.
property mu

The parameter mu of the log-normal distribution.

property t_start

t_start quantity; there are no spike times below this value.

property t_stop

t_stop quantity; there are no spike times above this value.